Journal of Food Bioactives, ISSN 2637-8752 print, 2637-8779 online |
Journal website www.isnff-jfb.com |
Original Research
Volume 31, September 2025, pages 76-87
Herbal formula volatile oil inhibit SARS-CoV-2 viral entry and replication in vitro
Figures
Tables
Number | ID | NAME | glide ligand efficiency | glide gscore | glide energy |
---|---|---|---|---|---|
1 | CHEBI:171934 | Isocyclocitral | −0.364 | −4.007 | −17.951 |
2 | CHEBI:89773 | 1,2-Dihydro-1,1,6-trimethylnaphthalene | −0.277 | −3.596 | −17.596 |
3 | CHEBI:167345 | Cedrene | −0.238 | −3.564 | −19.948 |
4 | CHEBI:167347 | Gamma-Selinene | −0.226 | −3.383 | −15.157 |
5 | CHEBI:10357 | (−)-Beta-caryophyllene | −0.187 | −2.807 | −9.286 |
6 | CHEBI:180521 | D6-Ambrettolide | −0.154 | −2.763 | −12.213 |
7 | CHEBI:63190 | (+)-Beta-caryophyllene | −0.179 | −2.68 | −10.828 |
8 | CHEBI:62224 | (−)-7-Epi-alpha-selinene | −0.175 | −2.629 | −15.377 |
9 | CHEBI:62757 | Alpha-curcumene | −0.169 | −2.529 | −17.887 |
10 | CHEBI:64361 | Beta-sesquiphellandrene | −0.164 | −2.465 | −15.725 |
11 | CHEBI:84851 | Ethyl linolenate | −0.085 | −1.862 | −30.722 |
12 | CHEBI:31572 | Ethyl linoleate | −0.071 | −1.552 | −25.76 |
13 | CHEBI:34687 | Dibutyl phthalate | −0.034 | −0.681 | −27.935 |
14 | CHEBI:32936 | Tetracosane | 0.001 | 0.013 | −26.007 |
15 | CHEBI:46050 | Docosane | 0.002 | 0.037 | −22.23 |
16 | CHEBI:17327 | Phytol | 0.029 | 0.611 | −25.452 |
17 | CHEBI:39238 | (Z,E)-Alpha-farnesene | 0.049 | 0.742 | −17.625 |
18 | CHEBI:17351 | Linoleic acid | 0.071 | 1.42 | −22.532 |
19 | CHEBI:69080 | Methyl linoleate | 0.072 | 1.515 | −25.416 |
20 | CHEBI:10418 | Trans-beta-farnesene | 0.111 | 1.669 | −18.428 |
21 | CHEBI:30813 | Decanoic acid | 0.161 | 1.927 | −14.954 |
22 | CHEBI:15756 | Hexadecanoic acid | 0.133 | 2.394 | −21.115 |
23 | CHEBI:43619 | Icosane | 0.154 | 3.077 | −22.779 |
24 | CHEBI:16148 | Heptadecane | 0.189 | 3.221 | −20.402 |
25 | CHEBI:32927 | Nonadecane | 0.171 | 3.249 | −21.935 |
26 | CHEBI:32926 | Octadecane | 0.189 | 3.405 | −20.733 |
27 | CHEBI:132293 | 2-Methylicosane | 0.162 | 3.407 | −21.296 |
Number | ID | NAME | glide ligand efficiency | glide gscore | glide energy |
---|---|---|---|---|---|
1 | CHEBI:132824 | Spathulenol | −0.312 | −4.995 | −29.469 |
2 | CHEBI:167328 | 2-p-Menthen-1-ol | −0.435 | −4.781 | −22.01 |
3 | CHEBI:176780 | Dihydroactinidiolide | −0.365 | −4.739 | −21.911 |
4 | CHEBI:50040 | Thujone | −0.429 | −4.715 | −18.481 |
5 | CHEBI:4609 | Dimethyl phthalate | −0.322 | −4.514 | −27.789 |
6 | CHEBI:17854 | Cyclohexanone | −0.636 | −4.454 | −18.001 |
7 | CHEBI:22469 | Alpha-terpineol | −0.405 | −4.454 | −26.024 |
8 | CHEBI:173721 | Davanone | −0.262 | −4.453 | −29.093 |
9 | CHEBI:27961 | 1,8-Cineole | −0.39 | −4.29 | −19.998 |
10 | CHEBI:3573 | Chamazulene | −0.301 | −4.209 | −22.475 |
11 | CHEBI:132905 | Alpha-cadinol | −0.256 | −4.094 | −23.184 |
12 | CHEBI:28093 | Borneol | −0.372 | −4.088 | −19.503 |
13 | CHEBI:132899 | Beta-terpineol | −0.371 | −4.078 | −26.049 |
14 | CHEBI:29069 | Phthalic acid | −0.336 | −6.432 | −30.927 |
15 | CHEBI:36773 | Camphor | −0.366 | −4.03 | −18.778 |
16 | CHEBI:156228 | Viridiflorol | −0.251 | −4.017 | −23.82 |
17 | CHEBI:15397 | (S)-Camphor | −0.364 | −4.003 | −18.068 |
18 | CHEBI:49045 | Germacrene D | −0.26 | −3.893 | −22.31 |
19 | CHEBI:10577 | Gamma-terpinene | −0.368 | −3.684 | −18.022 |
20 | CHEBI:61699 | (−)-Alpha-gurjunene | −0.246 | −3.683 | −25.021 |
21 | CHEBI:63709 | Bicyclogermacrene | −0.24 | −3.595 | −24.5 |
22 | CHEBI:50025 | Beta-pinene | −0.331 | −3.31 | −15.545 |
23 | CHEBI:17327 | Phytol | −0.072 | −1.503 | −39.271 |
24 | CHEBI:145715 | Hex-3-en-1-ol | −0.158 | −1.108 | −17.563 |
25 | CHEBI:185431 | Pentane-1,5-diol | −0.143 | −1.001 | −23.626 |
26 | CHEBI:39242 | cis-Beta-farnesene | 0.05 | 0.743 | −25.779 |
27 | CHEBI:17302 | Pentadecanal | 0.136 | 2.173 | −30.775 |
Number | ID | NAME | glide ligand efficiency | glide gscore | glide energy |
---|---|---|---|---|---|
1 | CHEBI:41237 | Benzyl benzoate | −0.384 | −6.146 | −32.778 |
2 | CHEBI:28266 | Fluorene | −0.454 | −5.901 | −24.18 |
3 | CHEBI:22469 | Alpha-terpineol | −0.535 | −5.89 | −25.072 |
4 | CHEBI:28851 | Phenanthrene | −0.416 | −5.83 | −24.734 |
5 | CHEBI:34247 | 2,6-Di-tert-butyl-4-methylphenol | −0.342 | −5.472 | −23.883 |
6 | CHEBI:32319 | Alpha-ionone | −0.35 | −4.906 | −23.664 |
7 | CHEBI:84851 | Ethyl linolenate | −0.17 | −3.745 | −36.322 |
8 | CHEBI:32936 | Tetracosane | −0.15 | −3.595 | −35.184 |
9 | CHEBI:17447 | Geraniol | −0.325 | −3.575 | −23.114 |
10 | CHEBI:32941 | Heptacosane | −0.114 | −3.082 | −39.933 |
11 | CHEBI:32938 | Pentacosane | −0.106 | −2.659 | −34.403 |
12 | CHEBI:17580 | Linalool | −0.236 | −2.598 | −21.637 |
13 | CHEBI:149547 | (2E,4E)-Deca-2,4-dienal | −0.233 | −2.568 | −24.047 |
14 | CHEBI:46050 | Docosane | −0.1 | −2.211 | −35.118 |
15 | CHEBI:34687 | Dibutyl phthalate | −0.098 | −1.956 | −39.578 |
16 | CHEBI:67252 | Farnesyl acetone | −0.097 | −1.85 | −32.469 |
17 | CHEBI:17351 | Linoleic acid | −0.092 | −1.846 | −38.83 |
18 | CHEBI:177721 | Methyl 9-oxononanoate | −0.073 | −0.946 | −29.415 |
19 | CHEBI:17327 | Phytol | −0.033 | −0.683 | −32.077 |
20 | CHEBI:42504 | Pentadecanoic acid | −0.039 | −0.664 | −33.772 |
21 | CHEBI:15756 | Hexadecanoic acid | −0.024 | −0.442 | −36 |
22 | CHEBI:28842 | Octadecanoic acid | −0.02 | −0.397 | −39.091 |
23 | CHEBI:30805 | Dodecanoic acid | −0.028 | −0.396 | −29.905 |
24 | CHEBI:30813 | Decanoic acid | −0.033 | −0.394 | −28.055 |
25 | CHEBI:69187 | Methyl palmitate | −0.015 | −0.277 | −33.707 |
26 | CHEBI:69080 | Methyl linoleate | −0.011 | −0.224 | −35.128 |
27 | CHEBI:28875 | Tetradecanoic acid | 0 | −0.004 | −30.723 |
28 | CHEBI:69188 | Methyl stearate | 0.006 | 0.136 | −36.556 |
29 | CHEBI:84156 | Methyl palmitoleate | 0.016 | 0.312 | −33.112 |
30 | CHEBI:84067 | Tetradecanal | 0.064 | 0.956 | −29.986 |
31 | CHEBI:45296 | Hexadecane | 0.111 | 1.774 | −28.734 |
32 | CHEBI:32927 | Nonadecane | 0.099 | 1.884 | −30.142 |
Number | ID | NAME | glide ligand efficiency | glide gscore | glide energy |
---|---|---|---|---|---|
1 | CHEBI:32325 | Beta-ionone | −0.352 | −4.927 | −27.773 |
2 | CHEBI:67206 | Geranyl acetone | −0.325 | −4.554 | −27.44 |
3 | CHEBI:42438 | 2-Methoxy-4-vinylphenol | −0.402 | −4.422 | −23.155 |
4 | CHEBI:67252 | Farnesyl acetone | −0.212 | −4.035 | −29.67 |
5 | CHEBI:17351 | Linoleic acid | −0.192 | −3.843 | −32.227 |
6 | CHEBI:16196 | Oleic acid | −0.187 | −3.741 | −35.214 |
7 | CHEBI:46050 | Docosane | −0.166 | −3.663 | −31.617 |
8 | CHEBI:17580 | Linalool | −0.329 | −3.614 | −22.597 |
9 | CHEBI:28716 | Palmitoleic acid | −0.183 | −3.299 | −28.459 |
10 | CHEBI:79053 | Diisobutyl phthalate | −0.164 | −3.287 | −31.689 |
11 | CHEBI:69080 | Methyl linoleate | −0.156 | −3.276 | −32.755 |
12 | CHEBI:17327 | Phytol | −0.147 | −3.087 | −26.609 |
13 | CHEBI:28842 | Octadecanoic acid | −0.154 | −3.08 | −30.355 |
14 | CHEBI:27432 | Alpha-linolenic acid | −0.144 | −2.893 | −31.987 |
15 | CHEBI:29019 | Nonanoic acid | −0.248 | −2.735 | −21.532 |
16 | CHEBI:133634 | Methyl linolenate | −0.13 | −2.725 | −35.695 |
17 | CHEBI:42504 | Pentadecanoic acid | −0.144 | −2.444 | −27.718 |
18 | CHEBI:16148 | Heptadecane | −0.144 | −2.441 | −29.375 |
19 | CHEBI:28897 | Pentadecane | −0.157 | −2.355 | −26.189 |
20 | CHEBI:87494 | Methyl laurate | −0.15 | −2.253 | −27.222 |
21 | CHEBI:41808 | Decane | −0.221 | −2.212 | −17.68 |
22 | CHEBI:28875 | Tetradecanoic acid | −0.134 | −2.15 | −25.702 |
23 | CHEBI:41253 | Tetradecane | −0.132 | −1.854 | −27.426 |
24 | CHEBI:35998 | Tridecane | −0.123 | −1.599 | −26.364 |
TCM | Latin name | Refractive index | pH | Density (g/mL) | |
---|---|---|---|---|---|
1 | Shixiangru | Moslae Herba | 1.4718 | 4.4 | 0.9012 |
2 | Maye Qianliguang | Senecionis Scandentis Hebra | 1.4716 | 4.4 | 0.9555 |
3 | Yuxing Cao | Houttuyniae Herba | 1.3408 | 4.4 | 0.8756 |
4 | Hongfeng | Acer Palmatum ‘Atropurpureum’, | 1.339 | 4.4 | 0.9227 |
5 | Ai Ye | Artemisiae Argyi Folium | 1.3334 | 4.4 | 0.9946 |
6 | Jinlian Hua | Lonicerae Japonicae Flos | 1.3343 | 4.4 | 0.8768 |
7 | Hangbai Ju | White Chrsanthemum | 1.3338 | 4.1 | 0.96 |
8 | Ye Juhua | Chrysanthemi Indici Flos | 1.3361 | 4.4 | 0.8346 |
9 | Jinyin Hua | Trollius Chinensis Bunge | 1.4679 | 4.5 | 0.872 |